QCNUP: a quality control pipeline for MNase-seq data

来源 :第七届全国生物信息学与系统生物学学术大会 | 被引量 : 0次 | 上传用户：xiaotang111

【摘要】

：

Nucleosomes are the basic units of chromatin,playing an important role in regulating interaction between DNA and proteins,resulting in influence on gene expression.Due to its feature that spread over

【作者】

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陈晓兰廖骥张勇

【机构】

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同济大学生命科学与技术学院,上海市信号转导与疾病研究重点实验室,上海200092

【出处】

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第七届全国生物信息学与系统生物学学术大会

【发表日期】

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2016年8期

【关键词】

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Nucleosome positioning Quality Control Database

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　　Nucleosomes are the basic units of chromatin,playing an important role in regulating interaction between DNA and proteins,resulting in influence on gene expression.Due to its feature that spread over all chromatin,its complicated and difficult to assess the quality of high-throughput sequencing MNase-seq datasets.Here we develop a quality control (QC) pipeline,named QCNUP to assess MNase-seq datasets.

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QCNUP: a quality control pipeline for MNase-seq data

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