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Objective:To explore the genetic variation and differentiation of 2 echinostomes from genus Echinostoma, i.e.Echinostoma revolutum (E. revolutum)andEchinostoma malayanum (E. malayanum) from Khon Kaen Province, Thailand.Methods: These parasites were compared at22enzymes encoding a presumptive30 loci by using multilocus enzyme electrophoresis (MEE) technique.Results: Twenty-two loci can be used as diagnostic markers to differentiate these2species.E. revolutum andE. malayanum had fixed genetic differences at70% of loci, whereas both species had fixed genetic differences from the liver fluke,Opisthorchis viverrini at91% of loci. Intraspecific variation within a population ofE. revolutum was observed at5 polymorphic loci.Conclusions:MEE is a powerful technique to investigate genetic variation and differentiation ofE. revolutum andE. malayanum.