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Mongolian medicine is an important part of traditional medicine, with its own unique theory system and clinical trials.Mongolian medicine believes that the human body is an organic whole what is composed of three basics, seven voxels, and three fouls.Under the adjustment of the three basics, seven voxels and three fouls will keep balanced state, and thus human body will keep healthy.Exogenous evil will disorder the three fouls, and thus seven voxels and three fouls will not in balanced state, and it will cause organs and tissues of human body to sickness.And the keep balance ability of human body is self-healing ability too.Mongolian medicine pays attention to self-healing ability;meanwhile, in the process of take medicine, it pays attention to influence of time.Defer to relationship of man and nature, theory that man is an integral part of nature.So in process of Mongolian medicine clinical treatment, its hard to see some toxic and side effects.In theory, it is much different from modem medicine, in this article it is illustrated too.Adhere to the characteristics of Mongolian medicine, and preventing from ideology Occidentalizing of Mongolian medicine.Modem medicine is Counter medicine and experimental medicine, traditional medicine and Mongolian medicine are integral medicine based on balance.Currently, in Chinese Medical system, Western medicine and traditional medical are combined and coexist.In nationwide, medical colleges combine the traditional and western medicine, and the fmal result is that traditional medicine Occidentalize globally, especially in large state hospital.At American FDA 2007:Explicitly put forwarded traditional medicine and mainstream medicines are totally different, traditional medicine is arousing self-healing ability of human body.If the traditional medicine blurs its development direction, and Occidentalize its ideology, it means the traditional medicine will be destroyed, but not just only bad treatment effect.Relationship of traditional medicine and modem medicine is not mutual exclusion,but mutually beneficial, what is the trend in development of medicine.Common people will not suffer from overtreatment.