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The influences of the configurational disorders on phononic band gaps and on waveguide modes are investigated for the two-dimensional phononic crystals consisting of water cylinders periodically arrayed in mercury. Two types of conflgurational disorders, relevant to the cylinder position and cylinder size respectively, are taken into account. It is found that the phononic band gap and the guide band are sensitive to the disorders, and generally become narrower with the increasing disorders. It is also found that the waveguide side walls without disorder can significantly prevent the guide modes in the waveguide from influence by the disorders in the crystals to a large amount.