Hypoxic microenvironment induced spatial transcriptome changes in pancreatic cancer

来源 :癌症生物学与医学(英文版) | 被引量 : 0次 | 上传用户:liuhu8207
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
Objective:Hypoxia is a significant feature of solid tumors, including pancreatic ductal adenocarcinoma (PDAC). It is associated with tumor invasion, metastasis, and drug resistance. However, the spatial distribution of hypoxia-related heterogeneity in PDAC remains unclear. Methods:Spatial transcriptomics (STs), a new technique, was used to investigate the ST features of engrafted human PDAC in the ischemic hind limbs of nude mice. Transcriptomes from ST spots in the hypoxic tumor and the control were clustered using differentially-expressed genes. These data were compared to determine the spatial organization of hypoxia-induced heterogeneity in PDAC. Clinical relevance was validated using the Tumor Cancer Genome Atlas and KM-plotter databases. The CMAP website was used to identify molecules that may serve as therapeutic targets for PDAC. Results:ST showed that the tumor cell subgroups decreased to 7 subgroups in the hypoxia group, compared to 9 subgroups in the control group. Different subgroups showed positional characteristics and different gene signatures. Subgroup 6 located at the invasive front showed a higher proliferative ability under hypoxia. Subgroup 6 had active functions including cell proliferation, invasion, and response to stress. Expressions of hypoxia-related genes, LDHA, TPI1, and ENO1, induced changes. CMAP analysis indicated that ADZ-6482, a PI3K inhibitor, was targeted by the invasive subgroup in hypoxic tumors. Conclusions:This study is the first to describe hypoxic microenvironment-induced spatial transcriptome changes in PDAC, and to identify potential treatment targets for PDAC. These data will provide the basis for further investigations of the prognoses and treatments of hypoxic tumors.
其他文献
虚拟现实(virtual reality,VR)是以计算机技术为核心,生成与一定范围真实环境在视、听、触感等方面近似的数字化环境,是人类在探索自然、认识自然过程中创造产生、逐步形成的一种用于认识自然、模拟自然,进而更好地适应和利用自然的科学方法和技术[1]。目前,VR技术广泛运用于军事、航空航天,公共安全、工业设计、医学、规划、交通、文化教育等行业和部门[2],该技术具有以下三个基本特征:沉浸感(immersion)、交互性(interaction)和构想性(imagination)。
Objective: In some patients with adenomatous polyposis, an identifiable pathogenic variant of known associated genes cannot be found. Researchers have studied t
Objective: Apatinib is an oral TKI targeting VEGFR-2. Single-agent apatinib treatment has been shown to produce an objective response in patients with pretreate
Objective:Significant efforts are currently being made to identify novel biomarkers for the diagnosis and risk stratification of prostate cancer (PCa). Metabolo
目的:探讨生长抑素联合乌司他丁治疗重症急性胰腺炎的临床疗效以及对患者炎症反应和免疫功能的影响。方法:选取2014年4月~2019年4月本院普外科接收的80例确诊为重症急性胰腺炎患者作为研究对象,按照随机数字表法将其分为对照组和研究组,各40例。对照组给予注射用乌司他丁治疗,研究组在对照组基础上予以注射用生长抑素治疗。比较两组临床疗效、重症监护室(ICU)停留时间、住院时间及治疗前和治疗后免疫球蛋白G(IgG)、免疫球蛋白M(IgM)、免疫球蛋白A(IgA)、C反应蛋白(CRP)、白介素-6(IL-6)、肿
目的:探讨辛伐他汀联合乙酰半胱氨酸治疗慢性阻塞性肺疾病(COPD)稳定期的临床疗效以及对患者气道黏液高分泌和血清肿瘤坏死因子-α(TNF-α)、白介素-17(IL-17)、白三烯B 4(LTB4)水平的影响。方法:选取2017年6月~2019年12月本院收治的80例COPD稳定期患者作为研究对象,按照随机数字表法将其分为观察组和对照组,各40例。对照组口服乙酰半胱氨酸颗粒治疗,观察组在对照组基础上口服辛伐他汀片治疗,疗程均为12周。对比两组临床疗效、不良反应发生情况、治疗前和治疗后肺
目的了解慢性高血压并发子痫前期与非慢性高血压并发子痫前期患者的临床特征和母儿结局。方法回顾分析2009年1月1日至2017年12月31日在广州医科大学附属第三医院住院分娩的妊娠≥20周的单胎妊娠诊断为子痫前期的病例资料。按是否为慢性高血压分为慢性高血压并发子痫前期组及非慢性高血压并发子痫前期组,分析两组的临床特征与母儿结局。结果2361例子痫前期孕妇中,慢性高血压组共75例(27.08%),非慢性高血压组2286例(72.92%)。慢性高血压并发子痫前期较非慢性高血压的子痫前期组孕妇,其年龄更大,高龄及经
目的探讨优化移动卒中单元(mobile utroke unit,MSU)救治流程对急性缺血性脑卒中患者的效果。方法回顾性分析该院2020年1月—6月MSU出车接诊的30例急性缺血性脑卒中静脉溶栓患者,其中MSU救治流程优化后静脉溶栓的18例患者为试验组,MSU运行初期、流程优化前实施静脉溶栓的12例患者为对照组。收集两组的临床资料,比较两组的护理效率及临床结局。结果试验组的卒中专科护士首次静脉穿刺成功例数、发病至静脉溶栓时间、呼叫120至静脉溶栓时间、MSU到达现场至静脉溶栓时间均优于对照组,差异具有统计
目的:建立高效液相色谱法(HPLC)测定注射用右兰索拉唑中的有关物质。方法:采用Agilent Extend-C18(250 mm×4.6 mm,5μm)色谱柱,以三乙胺-水(用磷酸调节至pH 6.2)-乙腈(1∶60∶40)为流动相,检测波长为285 nm,流速为1.2 ml/min。对有关物质检查方法进行专属性研究,并对已知杂质进行了线性、精密度、溶液稳定性和回收率等方法学考察。结果:各杂质峰之间及与主峰之间均能实现良好分离,空白辅料溶液在保留时间3 min后无色谱峰出现;杂质A~E定量限分别为0.0
总结1例剖宫产术后阵发性睡眠性血红蛋白尿症患者继发脾破裂的护理经验.包括脾破裂后快速建立静脉通路,密切监测血压、腹内压变化;减少输血时的溶血反应并做好栓塞的观察与预