High Efficiency Characterization of Protein Glycosylation by Combining Glycosite and Site-specific G

来源 :第五届中国计算蛋白质组学研讨会 | 被引量 : 0次 | 上传用户:yeluanwu
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
  the glycosites and site-specific glycoforms of human liver tissues between HCC and adjacent normal tissues were well characterized,simultaneously.Totally,4491 site-specific glycoforms attached onto 786 glycosites could be quantified from the above two samples,including many significant changed glycosites and site-specific glycoforms.Additionally,this method was utilized to evaluate the aberrations of sialylated glycosylation between the HCC and healthy serum samples.And several significantly changed glycoforms attached onto immune proteins were obtained,and a small cohort study with 19 individual serum samples(10 HCC patients and 9 normal human volunteers)were performed using PRM based targeted analysis.Interestingly,several glycoforms were still obtained with the p-Value as low as 4.7X10-5.This platform provides a powerful tool for comprehensive analysis of glycosylation,which will have broad applications in glycoproteomics analysis.
其他文献
会议
会议
会议
会议
会议
Identifying peptides with unlimited post-translational modifications(PTMs)is a challenging task in the database searching based framework.The search space expands very fast with respect to the number
Ribosomally synthesized and posttranslationally modified peptides(RiPPs)are a major class of natural products revealed by the genome sequencing efforts of the past decades.These compounds are produced
会议
MATLAB code.The simplicity brings unique opportunities for performance optimization and analysis of the system behavior.For example,under this framework,GPU-based acceleration becomes simple,and we ar
会议
Aspirin,the acetylsalicylic acid(ASA),is a most widely prescribed medication used to relieve pain,fever,and inflammation.Recent studies have revealed new benefits of aspirin,including reduction of hea
会议
Tuberculosis(TB)has been a major global health threat,there is an urgent need to develop rapid,non-culture-required biomarker for rapidly and accurately detecting TB.Mycobacterium tuberculosis(MTB)ant