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N6-methyladenosine (m6A) has been recently identified as a conserved epitranscriptomic modification of eukaryotic mRNAs, but its features,regulatory mechanisms, and functions in ceil reprogramming are largely unknown.Here, we report m6A medification profiles in the mRNA transcriptomes of four cell types with different degrees of pluripotency.Comparative analysis reveals several features of m6A, especially geneand cell-type-specific m6A mRNA rnodifications.We also show that microRNAs (miRNAs) regulate m6A modification via a sequence pairing mechanism.